STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM71E2Uncharacterized protein. (573 aa)    
Predicted Functional Partners:
SPDYC
Speedy/RINGO cell cycle regulator family member C.
      
 0.592
OR4K5
Olfactory receptor.
      
 0.592
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.532
BUD31
BUD31 homolog.
   
 0.523
SNW1
SNW domain-containing protein 1.
    
 0.512
TTBK1
Tau tubulin kinase 1.
    
 
 0.490
ITPRIP
Inositol 1,4,5-trisphosphate receptor interacting protein.
      
 0.487
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.485
NME8
NME/NM23 family member 8.
  
 0.480
PRPF19
Pre-mRNA-processing factor 19.
   
 0.479
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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