Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM190Transmembrane protein 190. (162 aa)    
Predicted Functional Partners:
C20orf85
Chromosome 20 open reading frame 85.
   
  
 0.851
SPACA3
Sperm acrosome associated 3; Belongs to the glycosyl hydrolase 22 family.
   
  
 0.682
SPACA1
Sperm acrosome associated 1.
      
 0.614
ZPBP
Zona pellucida binding protein.
      
 0.597
LYZL4
Lysozyme like 4; Belongs to the glycosyl hydrolase 22 family.
   
  
 0.591
SPACA9
Uncharacterized protein.
      
 0.563
TMEM184A
Transmembrane protein 184A.
      
 0.556
IZUMO4
IZUMO family member 4.
      
 0.543
SPEM1
Spermatid maturation 1.
   
  
 0.523
AK7
Adenylate kinase 7.
      
 0.518
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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