H9KVM9_CALJA protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

H9KVM9_CALJA

ANF_receptor domain-containing protein. (267 aa)

Predicted Functional Partners:

ENSCJAP00000062671

0.964

GNAI3

0.953

GNAI1

0.953

GNAI2

0.937

GRM3

0.936

GRM2

0.900

GNG2

0.768

GRM7

0.768

GNA13

0.715

GNA12

0.715

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCJAP00000062671	GNAI1	ENSCJAP00000062671	ENSCJAP00000005923	ANF_receptor domain-containing protein.	Guanine nucleotide-binding protein G(I) subunit alpha-1 isoform 1.	0.629
ENSCJAP00000062671	GNAI3	ENSCJAP00000062671	ENSCJAP00000005564	ANF_receptor domain-containing protein.	Guanine nucleotide-binding protein G(K) subunit alpha.	0.629
ENSCJAP00000062671	GNG2	ENSCJAP00000062671	ENSCJAP00000061696	ANF_receptor domain-containing protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.641
ENSCJAP00000062671	GRM2	ENSCJAP00000062671	ENSCJAP00000010440	ANF_receptor domain-containing protein.	Metabotropic glutamate receptor 2 isoform a.	0.655
ENSCJAP00000062671	GRM3	ENSCJAP00000062671	ENSCJAP00000049600	ANF_receptor domain-containing protein.	Glutamate metabotropic receptor 3.	0.493
ENSCJAP00000062671	GRM7	ENSCJAP00000062671	ENSCJAP00000063883	ANF_receptor domain-containing protein.	Metabotropic glutamate receptor 7 isoform b.	0.436
ENSCJAP00000062671	H9KVM9_CALJA	ENSCJAP00000062671	ENSCJAP00000001503	ANF_receptor domain-containing protein.	ANF_receptor domain-containing protein.	0.964
GNA12	GNA13	ENSCJAP00000034831	ENSCJAP00000000442	Guanine nucleotide-binding protein subunit alpha-12.	G protein subunit alpha 13.	0.984
GNA12	GNG2	ENSCJAP00000034831	ENSCJAP00000061696	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.688
GNA12	GRM2	ENSCJAP00000034831	ENSCJAP00000010440	Guanine nucleotide-binding protein subunit alpha-12.	Metabotropic glutamate receptor 2 isoform a.	0.715
GNA12	GRM3	ENSCJAP00000034831	ENSCJAP00000049600	Guanine nucleotide-binding protein subunit alpha-12.	Glutamate metabotropic receptor 3.	0.715
GNA12	GRM7	ENSCJAP00000034831	ENSCJAP00000063883	Guanine nucleotide-binding protein subunit alpha-12.	Metabotropic glutamate receptor 7 isoform b.	0.715
GNA12	H9KVM9_CALJA	ENSCJAP00000034831	ENSCJAP00000001503	Guanine nucleotide-binding protein subunit alpha-12.	ANF_receptor domain-containing protein.	0.715
GNA13	GNA12	ENSCJAP00000000442	ENSCJAP00000034831	G protein subunit alpha 13.	Guanine nucleotide-binding protein subunit alpha-12.	0.984
GNA13	GNG2	ENSCJAP00000000442	ENSCJAP00000061696	G protein subunit alpha 13.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.866
GNA13	GRM2	ENSCJAP00000000442	ENSCJAP00000010440	G protein subunit alpha 13.	Metabotropic glutamate receptor 2 isoform a.	0.715
GNA13	GRM3	ENSCJAP00000000442	ENSCJAP00000049600	G protein subunit alpha 13.	Glutamate metabotropic receptor 3.	0.715
GNA13	GRM7	ENSCJAP00000000442	ENSCJAP00000063883	G protein subunit alpha 13.	Metabotropic glutamate receptor 7 isoform b.	0.715
GNA13	H9KVM9_CALJA	ENSCJAP00000000442	ENSCJAP00000001503	G protein subunit alpha 13.	ANF_receptor domain-containing protein.	0.715
GNAI1	ENSCJAP00000062671	ENSCJAP00000005923	ENSCJAP00000062671	Guanine nucleotide-binding protein G(I) subunit alpha-1 isoform 1.	ANF_receptor domain-containing protein.	0.629