STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC33A1Solute carrier family 33 member 1. (550 aa)    
Predicted Functional Partners:
SLC25A17
Peroxisomal membrane protein PMP34; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.780
SLC25A42
Mitochondrial coenzyme A transporter SLC25A42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.777
PPCS
Uncharacterized protein.
 
    
 0.757
PANK2
Pantothenate kinase 2.
   
  
 0.748
DNAJB9
DnaJ homolog subfamily B member 9.
   
 
 0.658
ATG9A
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
      
 0.619
PANK3
Uncharacterized protein.
   
  
 0.619
LIAS
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
      
 0.587
PPAN
Brix domain-containing protein.
      
 0.581
SLC7A6
Solute carrier family 7 member 6.
   
 
 0.579
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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