STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO5AMyosin VA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1855 aa)    
Predicted Functional Partners:
RAB11A
Ras-related protein Rab-11A isoform 1.
   
 0.896
RAB27A
RAB27A, member RAS oncogene family.
    
 0.868
RAB11B
RAB11B, member RAS oncogene family.
   
 0.840
SPIRE2
KIND domain-containing protein.
   
 0.840
RILPL2
Rab interacting lysosomal protein like 2.
    
 
 0.805
RAB27B
RAB27B, member RAS oncogene family.
    
 0.747
RAB10
Ras-related protein Rab-10.
    
 0.721
CALML5
Calmodulin-like protein 5.
    
 0.710
CALML3
Calmodulin-like protein 3; Belongs to the calmodulin family.
    
 0.709
CALM1
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.708
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.