STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM134Transmembrane protein 134 isoform a. (195 aa)    
Predicted Functional Partners:
EXOSC8
Exosome component 8.
      
 0.562
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
   
  
 0.481
PPP1R26
Protein phosphatase 1 regulatory subunit 26.
   
  
 0.477
GPR152
G protein-coupled receptor 152; Belongs to the G-protein coupled receptor 1 family.
      
 0.465
RNF170
E3 ubiquitin-protein ligase RNF170 isoform a.
      
 0.456
SLC25A27
Mitochondrial uncoupling protein 4 isoform 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.456
DIS3
Exosome complex exonuclease RRP44 isoform a; Belongs to the RNR ribonuclease family.
      
 0.451
TOR2A
Torsin family 2 member A.
      
 0.449
PPM1E
Protein phosphatase, Mg2+/Mn2+ dependent 1E.
      
 0.446
PITPNM1
Membrane-associated phosphatidylinositol transfer protein 1 isoform a.
      
 0.433
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.