Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTPRCAPProtein tyrosine phosphatase receptor type C-associated protein. (203 aa)    
Predicted Functional Partners:
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 
 0.806
CORO1B
Coronin; Belongs to the WD repeat coronin family.
   
  
 0.753
ACAP1
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1.
   
  
 0.726
FRMD5
FERM domain-containing protein 5 isoform 2.
      
 0.700
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
      
 0.700
RSC1A1
Regulator of solute carriers 1.
      
 0.700
CNPY4
Canopy FGF signaling regulator 4.
      
 0.700
FAM171A1
Family with sequence similarity 171 member A1.
      
 0.700
HS3ST5
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.700
ACOT11
Acyl-coenzyme A thioesterase 11 isoform 2.
      
 0.699
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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