STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMOD2Tropomodulin-2 isoform a. (351 aa)    
Predicted Functional Partners:
GSN
Gelsolin isoform a.
    
 
 0.857
RBM18
Putative RNA-binding protein 18.
    
   0.843
SCIN
Scinderin.
    
 
 0.837
ENSCJAP00000060083
Uncharacterized protein.
    
 
 0.784
DBN1
Drebrin 1.
   
 
 0.759
NEB
Nebulin.
   
 0.741
TPM4
Tropomyosin alpha-4 chain isoform 1; Belongs to the tropomyosin family.
   
 0.740
LSP1
Uncharacterized protein.
    
 
 0.714
ADD2
Beta-adducin isoform a.
   
 
 0.701
SSH1
Slingshot protein phosphatase 1.
    
 
 0.699
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.