Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRM1Mitochondrial rRNA methyltransferase 1. (351 aa)    
Predicted Functional Partners:
MRM2
FtsJ domain-containing protein.
  
  
 0.836
RPF2
Ribosome production factor 2 homolog.
   
  
 0.830
NOL6
Nucleolar protein 6.
   
  
 0.812
RRP12
Ribosomal RNA processing 12 homolog.
   
  
 0.806
CGGBP1
CGG triplet repeat-binding protein 1.
    
   0.787
NOP16
Nucleolar protein 16 isoform 3.
   
  
 0.785
RRS1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
  
 0.766
MTERF3
Mitochondrial transcription termination factor 3.
    
 
 0.758
GRPEL2
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.756
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
    
 
 0.751
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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