STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHANK2SH3 and multiple ankyrin repeat domains 2. (1794 aa)    
Predicted Functional Partners:
DLGAP1
DLG associated protein 1.
    
 0.882
NLGN3
Neuroligin-3 isoform 1.
    
 0.860
DLG4
Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.
   
 0.827
NRXN1
Neurexin 1.
   
 
 0.826
DLGAP4
Disks large-associated protein 4 isoform a.
    
 0.822
NLGN1
Neuroligin-1.
    
 0.760
HOMER1
Homer scaffold protein 1.
    
 0.735
DLGAP2
DLG associated protein 2.
    
 0.678
NRXN2
Neurexin 2.
   
 
 0.672
CTTN
Cortactin.
    
 
 0.649
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.