STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP6Rho GTPase activating protein 6. (980 aa)    
Predicted Functional Partners:
HCCS
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
      
 0.841
ASPM
Abnormal spindle microtubule assembly.
   
   0.673
ESPL1
Extra spindle pole bodies like 1, separase.
   
  
 0.602
TTK
TTK protein kinase.
   
    0.599
KIF11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.594
ZCWPW2
Zinc finger CW-type and PWWP domain containing 2.
   
  
 0.594
WDR72
WD repeat domain 72.
      
 0.591
NDC80
NDC80 kinetochore complex component.
   
    0.580
AMTN
Amelotin.
      
 0.578
ODAM
Odontogenic, ameloblast associated.
      
 0.577
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.