STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFAP1Actin filament associated protein 1. (830 aa)    
Predicted Functional Partners:
GMDS
GDP-mannose 4,6 dehydratase isoform 1.
      
 0.778
TMCO1
Transmembrane and coiled-coil domains 1.
      
 0.773
SIX6
SIX homeobox 6.
      
 0.728
ARHGEF12
Rho guanine nucleotide exchange factor 12.
      
 0.692
ANLN
Anillin actin binding protein.
    
 
 0.665
SRC
Tyrosine-protein kinase.
    
 
 0.659
RBMS3
RNA binding motif single stranded interacting protein 3.
      
 0.626
TLCD5
TLC domain containing 5.
      
 0.620
YES1
Tyrosine-protein kinase.
    
 
 0.611
ATXN2
Ataxin 2.
      
 0.609
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.