STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMCR8Smith-Magenis syndrome chromosomal region candidate gene 8 protein. (933 aa)    
Predicted Functional Partners:
C9orf72
C9orf72-SMCR8 complex subunit.
    
 0.989
WDR41
WD repeat-containing protein 41.
    
 0.984
RAB39B
RAB39B, member RAS oncogene family (Predicted).
    
 0.941
ULK2
Unc-51 like autophagy activating kinase 2.
   
 0.925
RAB8A
Ras-related protein Rab-8A.
    
 0.925
TBK1
TANK binding kinase 1.
   
 0.923
TANK
TRAF family member-associated NF-kappa-B activator isoform a.
     
 0.914
FNIP1
Folliculin-interacting protein 1 isoform 1.
    
 
 0.646
FLCN
Folliculin isoform 1.
      
 0.645
ATG13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
    
 0.615
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.