STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C2General transcription factor 3C polypeptide 2. (911 aa)    
Predicted Functional Partners:
GTF3C1
General transcription factor IIIC subunit 1.
   
 0.970
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.967
GTF3C4
General transcription factor 3C polypeptide 4.
    
 0.965
GTF3C5
General transcription factor 3C polypeptide 5 isoform 2.
   
 0.952
GTF3C6
General transcription factor IIIC subunit 6.
    
 0.785
POLR3A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.715
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
    
 0.676
POLR2H
RNA polymerase II subunit H.
    
 0.660
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit.
   
 
 0.649
POLR3K
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.618
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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