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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAP1L1Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (404 aa)    
Predicted Functional Partners:
IPO9
Importin-9.
   
 
 0.688
PHF21A
PHD finger protein 21A isoform a.
    
 
 0.631
RPP40
Ribonuclease P/MRP subunit p40.
    
 
 0.624
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.620
EP400
E1A binding protein p400.
    
 
 0.604
ZNHIT2
Zinc finger HIT-type containing 2.
   
  
 0.583
SMARCC1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.
   
  
 0.577
UBE2O
Ubiquitin-conjugating enzyme E2 O.
    
 
 0.558
NEK9
Serine/threonine-protein kinase Nek9.
   
 
 0.558
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.552
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.