STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUPD1Dual specificity phosphatase and pro isomerase domain containing 1; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (250 aa)    
Predicted Functional Partners:
VRK3
VRK serine/threonine kinase 3.
    
 0.546
MS4A8
Membrane spanning 4-domains A8.
      
 0.534
SMIM12
Small integral membrane protein 12.
   
 
 0.494
MTHFSD
Methenyltetrahydrofolate synthase domain-containing protein isoform 4.
   
    0.487
UTP15
U3 small nucleolar RNA-associated protein 15 homolog.
   
    0.485
NPAS4
Neuronal PAS domain protein 4.
   
    0.473
MAPK7
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.461
MAPK1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.461
MAPK3
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.461
PGP
Phosphoglycolate phosphatase; Belongs to the HAD-like hydrolase superfamily.
      
 0.459
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.