STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENG8Leukocyte receptor cluster member 8 (Predicted). (800 aa)    
Predicted Functional Partners:
PCID2
PCI domain containing 2.
   
 
 0.951
CDC42EP5
CDC42 effector protein 5 (Predicted).
      
 0.923
TTYH1
Protein tweety homolog; Probable chloride channel; Belongs to the tweety family.
      
 0.903
SEM1
Uncharacterized protein.
    
 
 0.883
VSTM1
V-set and transmembrane domain containing 1.
      
 0.726
RPS9
Ribosomal protein S9 (Predicted); Belongs to the universal ribosomal protein uS4 family.
   
  
 0.694
FCAR
Fc fragment of IgA receptor.
      
 0.692
GIGYF1
GRB10 interacting GYF protein 1.
   
  
 0.622
NCR2
Natural cytotoxicity triggering receptor 2.
      
 0.615
ILVBL
IlvB acetolactate synthase like; Belongs to the TPP enzyme family.
      
 0.574
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.