STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3RF3SH3 domain containing ring finger 3. (879 aa)    
Predicted Functional Partners:
ENSCJAP00000067149
Uncharacterized protein.
   
 0.741
ENSCJAP00000069046
J domain-containing protein.
   
 0.741
VTA1
Vacuolar protein sorting-associated protein VTA1 homolog.
    
   0.696
TNK1
Tyrosine kinase non receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 
 0.667
TNK2
Tyrosine kinase non receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 
 0.667
ASMTL
Acetylserotonin O-methyltransferase like.
   
  
 0.650
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
    
 
 0.647
ENSCJAP00000070525
Uncharacterized protein.
    
 
 0.647
AKAP17A
A-kinase anchoring protein 17A.
      
 0.646
CLHC1
Clathrin heavy chain linker domain-containing protein 1.
    
  0.645
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.