STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTN3Actinin alpha 3 (gene/pseudogene). (942 aa)    
Predicted Functional Partners:
ACTN2
Actinin alpha 2.
  
0.947
MYOZ1
Myozenin 1.
   
 
 0.911
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.837
TNNC2
Troponin C2, fast skeletal type.
   
 0.802
MYL1
Myosin light chain 1.
   
 0.793
ANKRD23
Ankyrin repeat domain 23.
   
 0.782
MYH3
Myosin heavy chain 3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.763
RPL3L
Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family.
   
  
 0.744
VCL
Vinculin.
   
 
 0.730
MIOX
Myo-inositol oxygenase.
      
 0.726
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.