STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLOD2Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform 1. (758 aa)    
Predicted Functional Partners:
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
  
0.968
COLGALT2
Collagen beta(1-O)galactosyltransferase 2.
   
0.951
COLGALT1
Collagen beta(1-O)galactosyltransferase 1.
   
0.951
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
  
 
 
0.949
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
  0.900
COL2A1
Collagen type II alpha 1 chain.
   
 0.720
COL1A1
Collagen alpha-1(I) chain preproprotein.
   
 0.706
NSD1
Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific isoform b.
    
 0.696
SETD7
Histone-lysine N-methyltransferase SETD7; Histone methyltransferase that specifically monomethylates 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. Plays a central role in the transcriptional activation of genes.
   
 0.693
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
  0.691
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.