STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYP8B1Cytochrome P450 family 8 subfamily B member 1; Belongs to the cytochrome P450 family. (495 aa)    
Predicted Functional Partners:
HSD3B7
Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7; Belongs to the 3-beta-HSD family.
   
 0.971
AKR1D1
Aldo-keto reductase family 1 member D1.
   
 
 0.957
AKR1C4
Aldo_ket_red domain-containing protein.
   
 
 0.955
CYP27A1
Cytochrome P450 family 27 subfamily A member 1; Belongs to the cytochrome P450 family.
     
0.949
F7GAU9_CALJA
Aldo_ket_red domain-containing protein.
   
 
 0.903
SQLE
Squalene epoxidase.
   
 0.809
NR0B2
Nuclear receptor subfamily 0 group B member 2.
   
 
 0.797
CH25H
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
   
 0.775
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.754
NR1H4
Nuclear receptor subfamily 1 group H member 4.
   
 
 0.753
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.