STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTNL2Butyrophilin like 2. (482 aa)    
Predicted Functional Partners:
LY6G6F
Lymphocyte antigen 6 family member G6F.
      
 0.898
ANKRD11
Ankyrin repeat domain 11.
    
 0.711
TRIM26
Tripartite motif-containing protein 26.
      
 0.671
TRIM39
Uncharacterized protein.
 
    
 0.620
TRIM10
Tripartite motif containing 10.
   
 0.601
RNF128
E3 ubiquitin-protein ligase RNF128 isoform 1.
     
 0.558
PSMB8
Proteasome subunit beta.
   
 
 0.543
PPP1R11
Protein phosphatase 1 regulatory inhibitor subunit 11.
      
 0.525
POU5F1-2
Uncharacterized protein.
    
 0.509
POU5F1
POU-specific domain-containing protein.
    
 0.509
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.