STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1368 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
   
  0.959
ENSCJAP00000078263
Uncharacterized protein.
   
  0.959
ITSN1
Intersectin 1.
    
  0.767
DDX60L
DExD/H-box 60 like.
   
 0.727
DDX1
ATP-dependent RNA helicase DDX1.
   
 0.707
AP2S1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.699
ATF3
Cyclic AMP-dependent transcription factor ATF-3 isoform 1.
   
 
 0.661
SESN2
Sestrin-2.
   
 
 0.659
TAOK1
Serine/threonine-protein kinase TAO1 isoform 1.
   
  
 0.657
SLU7
SLU7 homolog, splicing factor.
    
 0.657
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (14%) [HD]