STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYLDUbiquitin carboxyl-terminal hydrolase CYLD isoform 1; Belongs to the peptidase C19 family. (956 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.996
RIPK1
Receptor-interacting serine/threonine-protein kinase 1.
    
 0.992
TNFRSF1A
TNF receptor superfamily member 1A.
    
 0.986
TRAF2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.979
SQSTM1
Sequestosome-1 isoform 1.
    
 0.974
DDX58
Putative ATP-dependent RNA helicase DDX58.
    
 0.963
BCL3
BCL3 transcription coactivator.
   
 0.957
IKBKG
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.955
RNF31
E3 ubiquitin-protein ligase RNF31.
    
 0.952
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.943
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.