CPSF6 protein (Callithrix jacchus) - STRING interaction network

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Score

CPSF6

RRM domain-containing protein. (588 aa)

Predicted Functional Partners:

NUDT21

0.995

CPSF7

0.958

NUP153

0.942

U2AF2

0.933

TNPO3

0.923

CPSF3

0.868

CPSF2

0.856

CPSF1

0.853

CLP1

0.850

PCF11

0.849

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLP1	CPSF1	ENSCJAP00000016076	ENSCJAP00000051658	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Cleavage and polyadenylation specific factor 1.	0.939
CLP1	CPSF2	ENSCJAP00000016076	ENSCJAP00000033454	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Cleavage and polyadenylation specificity factor subunit 2.	0.941
CLP1	CPSF3	ENSCJAP00000016076	ENSCJAP00000011657	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Cleavage and polyadenylation specificity factor subunit 3.	0.957
CLP1	CPSF6	ENSCJAP00000016076	ENSCJAP00000003263	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	RRM domain-containing protein.	0.850
CLP1	CPSF7	ENSCJAP00000016076	ENSCJAP00000035815	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	RRM domain-containing protein.	0.794
CLP1	NUDT21	ENSCJAP00000016076	ENSCJAP00000071035	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.866
CLP1	PCF11	ENSCJAP00000016076	ENSCJAP00000026942	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	PCF11 cleavage and polyadenylation factor subunit.	0.998
CPSF1	CLP1	ENSCJAP00000051658	ENSCJAP00000016076	Cleavage and polyadenylation specific factor 1.	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	0.939
CPSF1	CPSF2	ENSCJAP00000051658	ENSCJAP00000033454	Cleavage and polyadenylation specific factor 1.	Cleavage and polyadenylation specificity factor subunit 2.	0.999
CPSF1	CPSF3	ENSCJAP00000051658	ENSCJAP00000011657	Cleavage and polyadenylation specific factor 1.	Cleavage and polyadenylation specificity factor subunit 3.	0.999
CPSF1	CPSF6	ENSCJAP00000051658	ENSCJAP00000003263	Cleavage and polyadenylation specific factor 1.	RRM domain-containing protein.	0.853
CPSF1	CPSF7	ENSCJAP00000051658	ENSCJAP00000035815	Cleavage and polyadenylation specific factor 1.	RRM domain-containing protein.	0.879
CPSF1	NUDT21	ENSCJAP00000051658	ENSCJAP00000071035	Cleavage and polyadenylation specific factor 1.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.916
CPSF1	PCF11	ENSCJAP00000051658	ENSCJAP00000026942	Cleavage and polyadenylation specific factor 1.	PCF11 cleavage and polyadenylation factor subunit.	0.991
CPSF1	U2AF2	ENSCJAP00000051658	ENSCJAP00000031483	Cleavage and polyadenylation specific factor 1.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.517
CPSF2	CLP1	ENSCJAP00000033454	ENSCJAP00000016076	Cleavage and polyadenylation specificity factor subunit 2.	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	0.941
CPSF2	CPSF1	ENSCJAP00000033454	ENSCJAP00000051658	Cleavage and polyadenylation specificity factor subunit 2.	Cleavage and polyadenylation specific factor 1.	0.999
CPSF2	CPSF3	ENSCJAP00000033454	ENSCJAP00000011657	Cleavage and polyadenylation specificity factor subunit 2.	Cleavage and polyadenylation specificity factor subunit 3.	0.999
CPSF2	CPSF6	ENSCJAP00000033454	ENSCJAP00000003263	Cleavage and polyadenylation specificity factor subunit 2.	RRM domain-containing protein.	0.856
CPSF2	CPSF7	ENSCJAP00000033454	ENSCJAP00000035815	Cleavage and polyadenylation specificity factor subunit 2.	RRM domain-containing protein.	0.872