STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF644Zinc finger protein 644 isoform 1. (1325 aa)    
Predicted Functional Partners:
CCDC24
Coiled-coil domain containing 24.
      
 0.854
SLC39A5
Solute carrier family 39 member 5.
      
 0.807
TUT4
Terminal uridylyltransferase 4 isoform a.
   
 
 0.727
EHMT2
Euchromatic histone lysine methyltransferase 2.
   
 0.715
LRPAP1
Alpha-2-macroglobulin receptor-associated protein.
      
 0.702
MED16
Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 
 0.674
SLC12A6
Solute carrier family 12 member 6.
    
 0.651
ZNF292
Zinc finger protein 292.
  
 
 0.640
CNOT2
CCR4-NOT transcription complex subunit 2.
   
  
 0.634
FAM189A2
Family with sequence similarity 189 member A2.
    
 
 0.627
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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