STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBX2PBX homeobox 2. (431 aa)    
Predicted Functional Partners:
PKNOX1
PBX/knotted 1 homeobox 1.
   
0.886
HOXB5
Homeobox B5.
    
 0.831
HOXC9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
    
 
 0.820
HOXB7
Homeobox protein Hox-B7.
    
 0.812
HOXB1
Homeobox B1.
    
 0.812
MEIS1
Meis homeobox 1.
   
0.740
MEIS2
Homeobox protein Meis2 isoform c.
   
0.740
ENSCJAP00000071518
Meis_PKNOX_N domain-containing protein.
   
 0.740
HOXB6
Homeobox protein Hox-B6.
    
 0.734
HOXB8
Homeobox B8.
    
 0.717
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.