STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPSB4SplA/ryanodine receptor domain and SOCS box containing 4. (273 aa)    
Predicted Functional Partners:
CUL5
Cullin-5; Belongs to the cullin family.
    
 0.757
MYCBP2
MYC binding protein 2.
    
 
 0.724
F7HV22_CALJA
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.711
ENSCJAP00000052967
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.711
ENSCJAP00000054818
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.711
ENSCJAP00000063987
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.711
CUL1
Cullin-1; Belongs to the cullin family.
   
 0.583
F6WC44_CALJA
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.569
SKP1
S-phase kinase-associated protein 1 isoform b; Belongs to the SKP1 family.
   
 0.569
ENSCJAP00000074230
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.569
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.