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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6WW47_CALJAUncharacterized protein. (189 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
     
0.922
ENSCJAP00000078263
Uncharacterized protein.
     
 0.922
LCP2
Lymphocyte cytosolic protein 2.
    
 0.909
WIPF1
WAS/WASL-interacting protein family member 1.
    
 0.801
VAV1
Vav guanine nucleotide exchange factor 1.
    
 0.799
PAK1
Non-specific serine/threonine protein kinase.
    
 0.798
WAS
WASP actin nucleation promoting factor.
    
 0.794
WASL
WASP like actin nucleation promoting factor.
    
 0.794
NCKIPSD
NCK interacting protein with SH3 domain.
    
 0.767
GRB2
Growth factor receptor-bound protein 2 isoform 1.
    
 0.738
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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