STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKIV2LSki2 like RNA helicase. (1246 aa)    
Predicted Functional Partners:
WDR61
WD repeat-containing protein 61.
    
 0.998
TTC37
Tetratricopeptide repeat domain 37.
   
 0.998
EXOSC9
Exosome complex component RRP45 isoform 2.
   
 0.955
EXOSC7
Exosome complex component RRP42.
   
 0.954
EXOSC1
Exosome complex component CSL4.
   
 0.951
EXOSC3
Exosome component 3.
   
 0.949
EXOSC2
Exosome component 2.
   
 0.949
EXOSC5
Exosome complex component RRP46.
   
 0.941
EXOSC8
Exosome component 8.
   
 0.941
EXOSC4
Exosome complex component RRP41.
   
 0.937
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.