STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT36Keratin 36; Belongs to the intermediate filament family. (468 aa)    
Predicted Functional Partners:
SPINK1
Serine peptidase inhibitor, Kazal type 1.
      
 0.778
DUSP13
Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
    
 
 0.775
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.772
CSF3R
Colony stimulating factor 3 receptor.
   
 0.617
COL2A1
Collagen type II alpha 1 chain.
    
 0.596
NAIF1
Nuclear apoptosis-inducing factor 1.
   
 
 0.548
TDRD9
Tudor domain containing 9.
    
 
 0.536
TDGF1
Growth factor; Belongs to the EGF-CFC (Cripto-1/FRL1/Cryptic) family.
   
 0.514
MAL
Mal, T cell differentiation protein.
  
   
 0.512
RANBP2
RAN binding protein 2.
    
 0.477
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.