STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLDN18Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (261 aa)    
Predicted Functional Partners:
TTC14
Tetratricopeptide repeat domain 14.
      
 0.785
DNAJC19
Mitochondrial import inner membrane translocase subunit TIM14 isoform 1.
      
 0.647
MCCC1
Methylcrotonoyl-CoA carboxylase 1.
      
 0.532
ARHGAP6
Rho GTPase activating protein 6.
      
 0.515
CCDC142
Coiled-coil domain containing 142.
      
 0.511
PDCD4
Programmed cell death protein 4 isoform 1.
      
 0.511
PEX19
Peroxisomal biogenesis factor 19 isoform a.
    
 0.502
CLDN16
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
0.501
CLDN12
Claudin 12 (Predicted).
     
 0.496
PEX3
Peroxisomal biogenesis factor 3.
     
 0.487
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.