STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDHD2Phospholipase DDHD2 isoform 1. (711 aa)    
Predicted Functional Partners:
PNPLA6
Patatin like phospholipase domain containing 6.
   
  
 0.811
DDHD1
Phospholipase DDHD1 isoform c.
   
 
0.778
SPG21
Maspardin isoform a.
      
 0.775
SPG20
Spartin.
      
 0.775
ZFYVE26
Zinc finger FYVE-type containing 26.
    
 
 0.773
GJC2
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.770
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.721
NIPA1
Uncharacterized protein.
      
 0.696
SEC31A
WD_REPEATS_REGION domain-containing protein.
    
 0.659
SEC31B
SEC31 homolog B, COPII coat complex component.
    
 0.659
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.