STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCC1Chloride channel CLIC like 1. (551 aa)    
Predicted Functional Partners:
LOC100410987
Cytochrome c oxidase assembly protein COX15 homolog isoform 1.
  
 
 0.878
COX11
Cytochrome c oxidase copper chaperone COX11.
  
 
 0.869
LOC100414136
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
  
 
 0.706
ENSCJAP00000076462
Uncharacterized protein.
  
 
 0.706
CYC1
Cytochrome c1, heme protein, mitochondrial.
    
 0.603
LOC100401281
Uncharacterized protein.
    
 
 0.583
COX5A
Uncharacterized protein.
    
 
 0.583
SCO1
SCO cytochrome c oxidase assembly protein 1.
  
  
 0.578
SCO2
SCO cytochrome c oxidase assembly protein 2.
  
  
 0.578
CISD3
CDGSH iron-sulfur domain-containing protein 3, mitochondrial.
    
 
 0.556
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.