STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHD1EH domain containing 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (618 aa)    
Predicted Functional Partners:
ZFYVE20
Rabenosyn, RAB effector.
    
 0.989
RAB11FIP2
RAB11 family interacting protein 2.
    
 0.944
BRF2
Uncharacterized protein.
    
 0.916
RAB11FIP5
Uncharacterized protein.
     
 0.905
TMEM30B
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
      
 0.903
TMEM30A
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
      
 0.743
SNAP29
Synaptosomal-associated protein 29.
    
 
 0.728
EHD3
EH domain-containing protein 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
  
 
 
0.687
MICALL2
MICAL like 2.
    
 
 0.679
ATG2A
Autophagy related 2A.
      
 0.644
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.