STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRR14Proline rich 14. (581 aa)    
Predicted Functional Partners:
CBX5
Chromobox protein homolog 5.
    
 
 0.762
AHCTF1
AT-hook containing transcription factor 1.
      
 0.562
FBXL19
F-box and leucine rich repeat protein 19.
      
 0.551
RRP1B
Ribosomal RNA processing protein 1 homolog B.
      
 0.547
PPP2CB
Serine/threonine-protein phosphatase.
   
   0.537
ENSCJAP00000076369
Uncharacterized protein.
      
 0.536
PPP2R1A
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.
    
   0.461
VCAN
Versican.
  
     0.410
PRSS53
Serine protease 53; Belongs to the peptidase S1 family.
      
 0.400
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.