STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGD6FYVE, RhoGEF and PH domain containing 6. (1430 aa)    
Predicted Functional Partners:
SLC9B2
Solute carrier family 9 member B2.
    
 
 0.689
ARAP1
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1.
   
  
 0.623
UHMK1
Serine/threonine-protein kinase Kist isoform 1.
      
 0.564
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
     
 0.533
TMEM14A
Transmembrane protein 14A.
      
 0.526
ARHGEF16
Rho guanine nucleotide exchange factor 16.
   
  
0.481
GGT5
Gamma-glutamyltransferase 5.
      
 0.467
MOCOS
Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.
      
 0.455
SYT1
Synaptotagmin-1.
      
 0.453
NELL1
Neural EGFL like 1.
    
 
 0.452
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (34%) [HD]