STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF150RING finger protein 150. (438 aa)    
Predicted Functional Partners:
RNF186
Ring finger protein 186.
     
 0.855
RNF175
RING finger protein 175.
      
 0.854
RNF182
E3 ubiquitin-protein ligase RNF182.
     
 0.819
RNF183
Ring finger protein 183.
     
 0.814
RNF128
E3 ubiquitin-protein ligase RNF128 isoform 1.
   
0.598
BNIP1
Vesicle transport protein SEC20 isoform BNIP1.
   
  
 0.591
RNF152
E3 ubiquitin-protein ligase RNF152.
     
 0.590
CGRRF1
Cell growth regulator with RING finger domain protein 1.
     
 0.588
VWA5A
Von Willebrand factor A domain containing 5A.
   
 0.583
RNF103
E3 ubiquitin-protein ligase RNF103 isoform 1.
      
 0.581
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.