STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH19Cadherin 19; Cadherins are calcium-dependent cell adhesion proteins. (772 aa)    
Predicted Functional Partners:
KCNJ6
Potassium voltage-gated channel subfamily J member 6.
      
 0.597
KCNJ15
Potassium voltage-gated channel subfamily J member 15.
      
 0.574
KLHL32
Kelch-like protein 32.
     
 0.570
GPR19
Putative G-protein coupled receptor 19.
      
 0.564
FOXI2
Forkhead box I2.
     
 0.541
SALL3
Uncharacterized protein.
      
 0.527
GPR22
G protein-coupled receptor 22.
      
 0.524
MYORG
Myogenesis regulating glycosidase (putative); Belongs to the glycosyl hydrolase 31 family.
   
  
 0.513
RAPGEF2
Rap guanine nucleotide exchange factor 2.
    
 
 0.511
PLP1
Myelin proteolipid protein isoform 1.
   
  
 0.509
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.