SLFNL1 protein (Callithrix jacchus) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

SLFNL1

Schlafen like 1. (405 aa)

Predicted Functional Partners:

RTRAF

0.892

RTCB

0.860

FAM98C

0.706

ENSCJAP00000068556

0.706

EPRS1

0.670

ZBTB8OS

0.574

SF3B1

0.543

SF3B3

0.535

PES1

0.527

PHF5A

0.519

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCJAP00000068556	RTCB	ENSCJAP00000068556	ENSCJAP00000011386	Uncharacterized protein.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.490
ENSCJAP00000068556	RTRAF	ENSCJAP00000068556	ENSCJAP00000012877	Uncharacterized protein.	RNA transcription, translation and transport factor.	0.887
ENSCJAP00000068556	SLFNL1	ENSCJAP00000068556	ENSCJAP00000005498	Uncharacterized protein.	Schlafen like 1.	0.706
EPRS1	PES1	ENSCJAP00000079038	ENSCJAP00000019595	Uncharacterized protein.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.	0.675
EPRS1	RTCB	ENSCJAP00000079038	ENSCJAP00000011386	Uncharacterized protein.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.502
EPRS1	SLFNL1	ENSCJAP00000079038	ENSCJAP00000005498	Uncharacterized protein.	Schlafen like 1.	0.670
FAM98C	RTRAF	ENSCJAP00000025073	ENSCJAP00000012877	Family with sequence similarity 98 member C.	RNA transcription, translation and transport factor.	0.781
FAM98C	SLFNL1	ENSCJAP00000025073	ENSCJAP00000005498	Family with sequence similarity 98 member C.	Schlafen like 1.	0.706
PES1	EPRS1	ENSCJAP00000019595	ENSCJAP00000079038	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.	Uncharacterized protein.	0.675
PES1	SLFNL1	ENSCJAP00000019595	ENSCJAP00000005498	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.	Schlafen like 1.	0.527
PHF5A	SF3B1	ENSCJAP00000009122	ENSCJAP00000007188	PHD finger-like domain-containing protein 5A.	Splicing factor 3B subunit 1 isoform 1.	0.999
PHF5A	SF3B3	ENSCJAP00000009122	ENSCJAP00000060172	PHD finger-like domain-containing protein 5A.	Splicing factor 3B subunit 3.	0.999
PHF5A	SLFNL1	ENSCJAP00000009122	ENSCJAP00000005498	PHD finger-like domain-containing protein 5A.	Schlafen like 1.	0.519
RTCB	ENSCJAP00000068556	ENSCJAP00000011386	ENSCJAP00000068556	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	Uncharacterized protein.	0.490
RTCB	EPRS1	ENSCJAP00000011386	ENSCJAP00000079038	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	Uncharacterized protein.	0.502
RTCB	RTRAF	ENSCJAP00000011386	ENSCJAP00000012877	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	RNA transcription, translation and transport factor.	0.941
RTCB	SLFNL1	ENSCJAP00000011386	ENSCJAP00000005498	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	Schlafen like 1.	0.860
RTCB	ZBTB8OS	ENSCJAP00000011386	ENSCJAP00000053471	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	Zinc finger and BTB domain containing 8 opposite strand.	0.965
RTRAF	ENSCJAP00000068556	ENSCJAP00000012877	ENSCJAP00000068556	RNA transcription, translation and transport factor.	Uncharacterized protein.	0.887
RTRAF	FAM98C	ENSCJAP00000012877	ENSCJAP00000025073	RNA transcription, translation and transport factor.	Family with sequence similarity 98 member C.	0.781