STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTTNRotatin. (2228 aa)    
Predicted Functional Partners:
CEP76
Centrosomal protein 76.
      
 0.811
POC5
POC5 centriolar protein.
      
 0.796
CEP120
Centrosomal protein of 120 kDa isoform 1.
      
 0.782
STIL
STIL centriolar assembly protein.
   
 
 0.778
SPATA6
Spermatogenesis-associated protein 6.
      
 0.772
POC1B
POC1 centriolar protein B.
      
 0.772
CEP164
Centrosomal protein 164.
      
 0.761
CEP63
Centrosomal protein 63.
      
 0.740
CEP126
Centrosomal protein 126.
      
 0.725
CD226
CD226 molecule.
 
    
 0.705
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.