STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NETO1Neuropilin and tolloid-like protein 1 isoform 3. (533 aa)    
Predicted Functional Partners:
ASTN1
Astrotactin-1 isoform 1.
   
  
 0.728
KARS1
Lysine--tRNA ligase.
      
 0.712
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
   
 
 0.673
NXPH1
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
  
 0.614
GRIK1
Glutamate ionotropic receptor kainate type subunit 1.
   
 
 0.587
SEMA3E
Semaphorin-3E isoform 1; Belongs to the semaphorin family.
      
 0.539
CARHSP1
Calcium-regulated heat stable protein 1.
   
  
 0.531
KCNG4
BTB_2 domain-containing protein.
   
  
 0.508
PDE6A
Phosphodiesterase.
      
 0.506
ARR3
Arrestin 3.
      
 0.461
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.