STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH10Protocadherin 10. (1058 aa)    
Predicted Functional Partners:
ABI2
Uncharacterized protein.
    
 0.761
CYFIP1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
 0.735
WASF1
Wiskott-Aldrich syndrome protein family member 1.
    
 0.636
NCKAP1
NCK associated protein 1.
    
 0.604
C3H4orf33
UPF0462 protein C4orf33.
      
 0.557
DSCAM
DS cell adhesion molecule.
    
 0.554
PTCHD1
Patched domain-containing protein 1.
   
  
 0.511
BRK1
Uncharacterized protein.
    
  0.503
ENSCJAP00000074274
Uncharacterized protein.
    
  0.503
TLN2
Talin-2.
      
 0.494
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.