STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100395919Uncharacterized protein. (1300 aa)    
Predicted Functional Partners:
ENSCJAP00000068236
UBIQUITIN_CONJUGAT_2 domain-containing protein.
     
 0.538
UBE2V1
TMEM189_B_dmain domain-containing protein.
     
 0.538
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.515
KCNJ8
Potassium voltage-gated channel subfamily J member 8.
   
 0.476
KCNJ9
Potassium voltage-gated channel subfamily J member 9.
   
 0.456
KCNJ5
Potassium voltage-gated channel subfamily J member 5.
   
 0.456
KCNJ3
Uncharacterized protein.
   
 0.456
KCNJ12
ATP-sensitive inward rectifier potassium channel 12.
   
 0.456
KCNJ2
Potassium voltage-gated channel subfamily J member 2.
   
 0.456
KCNJ4
Potassium voltage-gated channel subfamily J member 4.
   
 0.456
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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