STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMSN1SAM domain, SH3 domain and nuclear localization signals 1. (669 aa)    
Predicted Functional Partners:
TNFSF15
Tumor necrosis factor ligand 1B.
      
 0.679
CD58
Lymphocyte function-associated antigen 3 isoform 1.
   
 
 0.605
ACAT2
Acetyl-CoA acetyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family.
      
 0.595
SKAP1
Src kinase associated phosphoprotein 1.
   
  
 0.581
GPR84
G protein-coupled receptor 84.
   
  
 0.549
PRSS36
Polyserase-2; Serine protease. Has a preference for substrates with an Arg instead of a Lys residue in position P1. Belongs to the peptidase S1 family.
      
 0.538
DEF8
Differentially expressed in FDCP 8 homolog.
   
  
 0.538
BCL2A1
BCL2 related protein A1.
   
  
 0.537
CCRL2
C-C motif chemokine receptor like 2; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.508
GPC3
Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
      
 0.499
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.