STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC2Zinc finger CCHC-type containing 2. (1176 aa)    
Predicted Functional Partners:
ZNF518A
Zinc finger protein 518A.
    
 
 0.792
NKAPD1
NKAP domain containing 1.
      
 0.733
USP38
Ubiquitin carboxyl-terminal hydrolase 38; Belongs to the peptidase C19 family.
    
 
 0.712
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
    
 
 0.646
SPCS3
Signal peptidase complex subunit 3.
      
 0.624
USP47
Ubiquitin specific peptidase 47; Belongs to the peptidase C19 family.
      
 0.620
PSMC6
26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.
   
 
 0.618
PHACTR2
Phosphatase and actin regulator.
      
 0.583
KTN1
Kinectin isoform a.
    
 
 0.577
PSMA2
Proteasome endopeptidase complex.
   
  
 0.570
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.