STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC42BPBCDC42 binding protein kinase beta; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1711 aa)    
Predicted Functional Partners:
UBXN2B
UBX domain protein 2B.
    
 0.758
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.724
H9KYE1_CALJA
PDZ domain-containing protein.
   
 0.678
MPP3
Membrane palmitoylated protein 3; Belongs to the MAGUK family.
   
 0.678
CEP290
Centrosomal protein 290.
    
 0.676
SEZ6L2
Seizure related 6 homolog like 2.
   
 0.670
KIF1B
Kinesin family member 1B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.667
ANO4
Anoctamin.
   
 
 0.648
IDH3A
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
     
 0.648
ILRUN
Inflammation and lipid regulator with UBA-like and NBR1-like domains.
    
 
 0.647
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.