Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF170E3 ubiquitin-protein ligase RNF170 isoform a. (258 aa)    
Predicted Functional Partners:
ERLIN2
ER lipid raft associated 2.
    
 
 0.917
ERLIN1
ER lipid raft associated 1.
    
 
 0.901
TMUB1
Transmembrane and ubiquitin-like domain-containing protein 1.
    
 
 0.893
CGRRF1
Cell growth regulator with RING finger domain protein 1.
      
 0.790
RNF130
E3 ubiquitin-protein ligase RNF130.
      
 0.773
FAM8A1
Protein FAM8A1.
      
 0.772
RNF126
RING finger protein 126.
      
 0.772
RNF145
Ring finger protein 145.
      
 0.771
RNFT1
Ring finger protein, transmembrane 1.
      
 0.739
AGPAT5
1-acylglycerol-3-phosphate O-acyltransferase 5.
   
  
 0.737
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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