STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAF1SR-related CTD associated factor 1. (1310 aa)    
Predicted Functional Partners:
ERF
ETS domain-containing transcription factor ERF.
   
    0.867
ERFL
ETS repressor factor like.
   
    0.802
SEPT7
Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
      
 0.780
LRP1
Prolow-density lipoprotein receptor-related protein 1.
      
 0.763
PRR12
Proline-rich protein 12.
  
  
 0.675
KRT18
IF rod domain-containing protein; Belongs to the intermediate filament family.
      
 0.620
POLR2G
Uncharacterized protein.
    
   0.550
ENSCJAP00000068191
Uncharacterized protein.
    
   0.550
RPRD1B
Regulation of nuclear pre-mRNA domain-containing protein 1B.
   
 
 0.549
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
    
   0.540
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.