STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C3General transcription factor IIIC subunit 3. (905 aa)    
Predicted Functional Partners:
GTF3C5
General transcription factor 3C polypeptide 5 isoform 2.
   
 0.998
POLR3D
Uncharacterized protein.
    
 0.986
GTF3C1
General transcription factor IIIC subunit 1.
    
 0.975
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit.
    
 0.972
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
   
 0.968
GTF3C2
General transcription factor 3C polypeptide 2.
    
 0.967
GTF3C4
General transcription factor 3C polypeptide 4.
   
 0.963
BRF1-2
Uncharacterized protein.
    
 0.958
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
   0.948
CPSF1
Cleavage and polyadenylation specific factor 1.
    
   0.947
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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